chore: reduce root cleanup files

.github/labeler.yml

@@ -217,9 +217,8 @@
           - "Dockerfile"
           - "Dockerfile.*"
           - "docker-compose.yml"
-          - "docker-setup.sh"
-          - "setup-podman.sh"
           - ".dockerignore"
+          - "deploy/fly.private.toml"
           - "scripts/docker/setup.sh"
           - "scripts/docker/sandbox/Dockerfile*"
           - "scripts/podman/setup.sh"

.github/workflows/ci.yml

@@ -1769,10 +1769,10 @@ jobs:
           python -m pip install pytest ruff pyyaml
 
       - name: Lint Python skill scripts
-        run: python -m ruff check skills
+        run: python -m ruff check --config skills/pyproject.toml skills
 
       - name: Test skill Python scripts
-        run: python -m pytest -q skills
+        run: python -m pytest -q -c skills/pyproject.toml skills
 
   checks-windows:
     permissions:

.github/zizmor.yml

@@ -0,0 +1,17 @@
+# zizmor configuration
+# https://docs.zizmor.sh/configuration/
+
+rules:
+  # Disable unpinned-uses - pinning to SHA hashes is a significant change
+  # that should be done deliberately, not enforced by pre-commit
+  unpinned-uses:
+    disable: true
+
+  # Disable excessive-permissions for now - adding explicit permissions
+  # blocks requires careful review of each workflow's needs
+  excessive-permissions:
+    disable: true
+
+  # Disable artipacked (persist-credentials) - low confidence finding
+  artipacked:
+    disable: true