diff --git a/scripts/tsdown-build.mjs b/scripts/tsdown-build.mjs
index 7a5ccdc4944..76531768410 100644
--- a/scripts/tsdown-build.mjs
+++ b/scripts/tsdown-build.mjs
@@ -1,6 +1,6 @@
 #!/usr/bin/env node
 
-import { spawn } from "node:child_process";
+import { spawn, spawnSync } from "node:child_process";
 import fs from "node:fs";
 import path from "node:path";
 import { pathToFileURL } from "node:url";
@@ -21,6 +21,8 @@ const DEFAULT_CAPTURE_BYTES = 8 * 1024 * 1024;
 const DEFAULT_HEARTBEAT_MS = 30_000;
 const TERMINATION_GRACE_MS = 5_000;
 const TSDOWN_OUTPUT_ROOTS = ["dist", "dist-runtime"];
+const GENERATED_SOURCE_DECLARATION_PATHSPEC = ":(glob)extensions/**/*.d.ts";
+const SOURCE_DECLARATION_SOURCE_EXTENSIONS = [".ts", ".tsx", ".mts", ".cts", ".js", ".mjs", ".cjs"];
 
 function removeDistPluginNodeModulesSymlinks(rootDir) {
   const extensionsDir = path.join(rootDir, "extensions");
@@ -93,6 +95,52 @@ export function pruneStaleRootChunkFiles(params = {}) {
   }
 }
 
+export function pruneUntrackedGeneratedSourceDeclarations(params = {}) {
+  const cwd = params.cwd ?? process.cwd();
+  const fsImpl = params.fs ?? fs;
+  const spawnSyncImpl = params.spawnSync ?? spawnSync;
+  let result;
+  try {
+    result = spawnSyncImpl(
+      "git",
+      ["ls-files", "--others", "--exclude-standard", "--", GENERATED_SOURCE_DECLARATION_PATHSPEC],
+      {
+        cwd,
+        encoding: "utf8",
+        stdio: ["ignore", "pipe", "ignore"],
+      },
+    );
+  } catch {
+    return 0;
+  }
+  if (result.status !== 0 || typeof result.stdout !== "string") {
+    return 0;
+  }
+
+  let removed = 0;
+  for (const rawPath of result.stdout.split(/\r?\n/u)) {
+    const relativePath = rawPath.trim().replaceAll("\\", "/");
+    if (!relativePath.startsWith("extensions/") || !relativePath.endsWith(".d.ts")) {
+      continue;
+    }
+    const declarationPath = path.join(cwd, relativePath);
+    const sourceBase = declarationPath.slice(0, -".d.ts".length);
+    const hasMatchingSource = SOURCE_DECLARATION_SOURCE_EXTENSIONS.some((extension) =>
+      fsImpl.existsSync(`${sourceBase}${extension}`),
+    );
+    if (!hasMatchingSource) {
+      continue;
+    }
+    try {
+      fsImpl.rmSync(declarationPath, { force: true });
+      removed += 1;
+    } catch {
+      // Best-effort cleanup; tsdown will still report any remaining stale files.
+    }
+  }
+  return removed;
+}
+
 export function pruneSourceCheckoutBundledPluginNodeModules(params = {}) {
   const cwd = params.cwd ?? process.cwd();
   const logger = params.logger ?? console;
@@ -326,6 +374,7 @@ function isMainModule() {
 
 if (isMainModule()) {
   pruneSourceCheckoutBundledPluginNodeModules();
+  pruneUntrackedGeneratedSourceDeclarations();
   pruneStaleRuntimeSymlinks();
   cleanTsdownOutputRoots();
   const invocation = resolveTsdownBuildInvocation();
diff --git a/test/scripts/tsdown-build.test.ts b/test/scripts/tsdown-build.test.ts
index 1573032c047..7757937d29b 100644
--- a/test/scripts/tsdown-build.test.ts
+++ b/test/scripts/tsdown-build.test.ts
@@ -7,6 +7,7 @@ import {
   createTsdownOutputScanner,
   pruneSourceCheckoutBundledPluginNodeModules,
   pruneStaleRootChunkFiles,
+  pruneUntrackedGeneratedSourceDeclarations,
   resolveTsdownBuildInvocation,
   runTsdownBuildInvocation,
 } from "../../scripts/tsdown-build.mjs";
@@ -138,6 +139,37 @@ describe("resolveTsdownBuildInvocation", () => {
     await expectPathMissing(path.join(rootDir, "dist-runtime"));
     await expect(fsPromises.readFile(unrelatedFile, "utf8")).resolves.toBe("keep\n");
   });
+
+  it("prunes untracked generated declaration files that shadow source entries", async () => {
+    const rootDir = createTempDir("openclaw-tsdown-source-dts-");
+    const signalDir = path.join(rootDir, "extensions", "signal");
+    const signalSrcDir = path.join(signalDir, "src");
+    await fsPromises.mkdir(signalSrcDir, { recursive: true });
+    await fsPromises.writeFile(path.join(signalDir, "api.ts"), "export {};\n");
+    await fsPromises.writeFile(path.join(signalDir, "api.d.ts"), "export {};\n");
+    await fsPromises.writeFile(path.join(signalSrcDir, "probe.ts"), "export {};\n");
+    await fsPromises.writeFile(path.join(signalSrcDir, "probe.d.ts"), "export {};\n");
+    await fsPromises.writeFile(
+      path.join(signalSrcDir, "ambient.d.ts"),
+      "declare const x: string;\n",
+    );
+
+    const removed = pruneUntrackedGeneratedSourceDeclarations({
+      cwd: rootDir,
+      spawnSync: () => ({
+        status: 0,
+        stdout:
+          "extensions/signal/api.d.ts\nextensions/signal/src/probe.d.ts\nextensions/signal/src/ambient.d.ts\n",
+      }),
+    });
+
+    expect(removed).toBe(2);
+    await expectPathMissing(path.join(signalDir, "api.d.ts"));
+    await expectPathMissing(path.join(signalSrcDir, "probe.d.ts"));
+    await expect(
+      fsPromises.readFile(path.join(signalSrcDir, "ambient.d.ts"), "utf8"),
+    ).resolves.toBe("declare const x: string;\n");
+  });
 });
 
 describe("createTsdownOutputScanner", () => {